Robust Methods for Assessing the Characteristics of Locomotor Activity Based on Markerless Video Capture Data
https://doi.org/10.32603/1993-8985-2024-27-3-108-123
Abstract
Introduction. Analysis of locomotor activity is essential in a number of biomedical and pharmacological research designs, as well as environmental monitoring. The movement trajectories of biological objects can be represented by time series exhibiting a complex multicomponent structure and non-stationary dynamics, thus limiting the effectiveness of conventional correlation and spectral time series analysis methods. Recordings obtained using markerless technologies are typically characterized by enhanced noise levels, including both instrumental noise and anomalous errors associated with false estimates of the location of the points of interest, as well as gaps in the trajectories, promoting an urgent need in the development of robust methods to assess the characteristics of locomotor activity.
Aim. Development of robust methods for assessing the characteristics of locomotor activity capable of efficient processing of noisy recordings obtained by markerless video-based motion capture systems.
Materials and methods. In order to assess the characteristics of locomotor activity, the relative movements of body parts of laboratory animals were analyzed using the stability metrics of the mutual dynamics of their trajectories, their relative delays, as well as the relative duration of the recording fragments when relatively stable mutual dynamics could be observed. The local maxima of the cross-correlation function of two body fragments, the minima of the standard deviation of the difference between their Hilbert phases, as well as their relative delays, were used as the metrics of mutual dynamics.
Results. The considered phase metrics were shown to explicitly reflect changes in locomotor activity, while the assessment of time delays using phase metric was shown to be prone to periodic error. The above limitation could be largely overcome using the correlation metrics, assuming that phase and correlation metrics could be combined.
Conclusion. The proposed robust methods provide stable estimates of the characteristics of locomotor activity based on markerless video capture recordings, altogether increasing the efficiency of diagnostic procedures and assessment of the therapeutic effect during rehabilitation.
Keywords
About the Authors
M. I. BogachevRussian Federation
Mikhail I. Bogachev - Dr Sci. (Eng.) (2018), Associate Professor (2011) of the Department of Radio Engineering Systems of Saint Petersburg Electrotechnical University.
5 F, Professor Popov St., St Petersburg 197022
K. R. Grigarevichius
Russian Federation
Konstantin R. Grigarevichius - Bachelor in Management in Technical Systems (2023, Saint Petersburg Electrotechnical University), student of the Faculty of Computer Technologies and Informatics of Saint Petersburg Elec¬trotechnical University.
5 F, Professor Popov St., St Petersburg 197022
N. S. Pyko
Russian Federation
Nikita S. Pyko - High-Research Teacher in Electronics, Radio Engineering and Communication Systems (2023, Saint Petersburg Electrotechnical University), Assistant of the Department of Radio Engineering Systems, Junior Researcher at the Scientific and Educational Center "Digital Telecommunication Technologies" of Saint Petersburg Electrotechnical University.
5 F, Professor Popov St., St Petersburg 197022
S. A. Pyko
Russian Federation
Svetlana A. Pyko - Cand. Sci (Eng.) (2000), Associate Professor (2003) of the Department of Radio Engineering Systems of Saint Petersburg Electrotechnical University.
5 F, Professor Popov St., St Petersburg 197022
M. Tsygankova
Russian Federation
Margarita Tsygankova - Bachelor in Radio Engineering (2022, Saint Petersburg Electrotechnical University), Engineer at the Scientific and Educational Center "Digital Telecommunication Technologies" of Saint Petersburg Electrotechnical University.
5 F, Professor Popov St., St Petersburg 197022
E. A. Plotnikova
Russian Federation
Elizaveta A. Plotnikova - Undergraduate student, Research Assistant at the OpenLab Research Laboratory of Gene and Cell Technologies, Kazan (Volga Region) Federal University.
18, Kremlevskaya St., Bldg. 1, Kazan 420008, Republic of Tatarstan
T. V. Ageeva
Russian Federation
Tatyana V. Ageeva - Cand. Sci (Biol.) (2018), Senior Research Scientist at the OpenLab Research Laboratory of Gene and Cell Technologies at Kazan (Volga Region) Federal University.
18, Kremlevskaya St., Bldg. 1, Kazan 420008, Republic of Tatarstan
Ya. O. Mukhamedshina
Russian Federation
Yana O. Mukhamedshina - Dr Sci. (Med.) (2021), Associate Professor (2021), Leading Research Scientist at the OpenLab Research Laboratory of Gene and Cell Technologies at Kazan (Volga Region) Federal University; Associate Professor of the Department of Histology, Cytology, and Embryology at Kazan State Medical University.
18, Kremlevskaya St., Bldg. 1, Kazan 420008, Republic of Tatarstan
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Review
For citations:
Bogachev M.I., Grigarevichius K.R., Pyko N.S., Pyko S.A., Tsygankova M., Plotnikova E.A., Ageeva T.V., Mukhamedshina Ya.O. Robust Methods for Assessing the Characteristics of Locomotor Activity Based on Markerless Video Capture Data. Journal of the Russian Universities. Radioelectronics. 2024;27(3):108-123. (In Russ.) https://doi.org/10.32603/1993-8985-2024-27-3-108-123